BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033B06SP1|AL429688
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1617 1785 0.0
>3x_Contig1617
Length = 15119
Score = 1785 bits (898), Expect = 0.0
Identities = 912/918 (99%), Gaps = 1/918 (0%)
Strand = Plus / Plus
Query: 1 atccttactccacacaattgctcgaataaatctttcattatctcagattgttcctctgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3805 atccttactccacacaattgctcgaataaatctttcattatctcagattgttcctctgcg 3864
Query: 61 tccgctttcgaatcctccaattgagaaatctttgtcttatcggattgcaattgtaccttc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3865 tccgctttcgaatcctccaattgagaaatctttgtcttatcggattgcaattgttccttc 3924
Query: 121 aaagattctatctcctgttgtttcaactctaattgtctcatcagcttcacattctcgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3925 aaagattctatctcctgttgtttcaactctaattgtctcatcagcttcacattctcgttt 3984
Query: 181 aacaccccttgtacggccaagtcagccttttcgaggcgatcctggaccgattccttatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3985 aacaccccttgtacggccaagtcagccttttcgaggcgatcctggaccgattccttatat 4044
Query: 241 tctgctagagggtccataagtaaacaaaaaacacagattccgagggtggtaattaactat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4045 tctgctagagggtccataagtaaacaaaaaacacagattccgagggtggtaattaactat 4104
Query: 301 gttgtcagaagattttgattagatatggtccagttaagttattcccaattgctgctcgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4105 gttgtcagaagattttgattagatatggtccagttaagttattcccaattgctgctcgtc 4164
Query: 361 aaatactgccgggacaatggttttatctatataaaccatggtctcaatcctatatgataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4165 aaatactgccgggacaatggttttatctatataaaccatggtctcaatcctatatgataa 4224
Query: 421 caatatatacacatatatcttactatgagcataaaagcccaatgattgagatttacctcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4225 caatatatacacatatatcttactatgagcataaaagcccaatgattgagatttacctcc 4284
Query: 481 caaaatatcaattccgaccccaacctccttacaccacaaatggcatcccccaataaaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4285 caaaatatcaattccgaccccaacctccttacaccacaaatggcatcccccaataaaagt 4344
Query: 541 agcagttcccaggaagtcacgtgagagaraagatgaatcttctttgaacaatttacggcg 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4345 agcagttcccaggaagtcacgtgagagaaaagatgaatcttctttgaacaatttacggcg 4404
Query: 601 agaaaaggacaattagcatgatggttgarataaagaaaaaaaacaaaaatgaaaagtctt 660
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4405 agaaaaggacaattagcatgatggttgaaataaagaaaaaaaacaaaaatgaaaagtctt 4464
Query: 661 taaatttaaacaatacctaatgtgtgtttgctgcaattgcacacacaatttcaatcattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4465 taaatttaaacaatacctaatgtgtgtttgctgcaattgcacacacaatttcaatcattt 4524
Query: 721 actgctaccaccacagtgcttaaatctactgagcgaca-smacggtaacttcaacgttct 779
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4525 actgctaccaccacagtgcttaaatctactgagcgacagcaacggtaacttcaacgttct 4584
Query: 780 aggctaactgtttcaattttggtttgaattacaaatttcaagtgctctctattgttttga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4585 aggctaactgtttcaattttggtttgaattacaaatttcaagtgctctctattgttttga 4644
Query: 840 agcttggaatctgaaaacaatagagactataattcttatcgttttcaccaattatctcgg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4645 agcttggaatctgaaaacaatagagactataattcttatcgttttcaccaattatctcgg 4704
Query: 900 cagaaagttttctttgag 917
||||||||||||||||||
Sbjct: 4705 cagaaagttttctttgag 4722
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8595
Number of Sequences: 1807
Number of extensions: 8595
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)